Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm9353-201ENSMUST00000200472 604 ntBASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Gm7046-201ENSMUST00000221351 977 ntBASIC9.05□□□□□ -0.96
Smco3Q8BQM7 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.05□□□□□ -0.96
Smco3Q8BQM7 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco3Q8BQM7 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Gm23270-201ENSMUST00000104055 131 ntBASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Gm27514-201ENSMUST00000183692 110 ntBASIC9.04□□□□□ -0.96
Smco3Q8BQM7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Gm31256-201ENSMUST00000194705 506 ntBASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smco3Q8BQM7 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Gm15824-201ENSMUST00000119516 955 ntBASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.03□□□□□ -0.96
Smco3Q8BQM7 Gm29396-201ENSMUST00000185659 716 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms