Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 AC144938.1-201ENSMUST00000223994 2167 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Gm23085-201ENSMUST00000157849 293 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Gm37319-201ENSMUST00000193500 636 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.85□□□□□ -0.67
Scaf4Q6PFF0 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm14130-201ENSMUST00000118417 987 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm17376-201ENSMUST00000166016 84 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm23694-201ENSMUST00000179335 110 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm43916-201ENSMUST00000205062 967 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scaf4Q6PFF0 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms