Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Gm14332-201ENSMUST00000121982 899 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm14370-201ENSMUST00000122460 868 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm15273-201ENSMUST00000142302 868 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm7023-201ENSMUST00000147295 868 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm24368-201ENSMUST00000175388 106 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm20945-201ENSMUST00000178122 1145 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm14357-201ENSMUST00000178352 868 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm14361-201ENSMUST00000178547 868 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm14348-201ENSMUST00000179183 868 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Gm37559-201ENSMUST00000193556 832 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gm7664-201ENSMUST00000221988 745 ntBASIC10.03□□□□□ -0.8
VcanQ62059 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Gm10020-201ENSMUST00000081993 612 ntBASIC10.03□□□□□ -0.8
VcanQ62059 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.03□□□□□ -0.8
VcanQ62059 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VcanQ62059 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.02□□□□□ -0.8
VcanQ62059 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
VcanQ62059 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.02□□□□□ -0.8
VcanQ62059 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
VcanQ62059 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
VcanQ62059 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.02□□□□□ -0.8
VcanQ62059 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
VcanQ62059 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
VcanQ62059 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC10.02□□□□□ -0.81
VcanQ62059 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC10.02□□□□□ -0.81
VcanQ62059 Gm38038-201ENSMUST00000193803 259 ntBASIC10.02□□□□□ -0.81
VcanQ62059 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC10.02□□□□□ -0.81
VcanQ62059 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
VcanQ62059 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
VcanQ62059 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.02□□□□□ -0.81
VcanQ62059 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.02□□□□□ -0.81
VcanQ62059 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.02□□□□□ -0.81
VcanQ62059 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
VcanQ62059 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Gm28645-201ENSMUST00000185859 564 ntBASIC10.02□□□□□ -0.81
VcanQ62059 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Gm18065-201ENSMUST00000221395 526 ntBASIC10.02□□□□□ -0.81
VcanQ62059 Gm19001-201ENSMUST00000222736 1651 ntBASIC10.02□□□□□ -0.81
VcanQ62059 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
VcanQ62059 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Gm42589-201ENSMUST00000199097 1751 ntBASIC10.02□□□□□ -0.81
VcanQ62059 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.02□□□□□ -0.81
VcanQ62059 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VcanQ62059 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Gm40414-201ENSMUST00000197608 481 ntBASIC10.01□□□□□ -0.81
VcanQ62059 Gm33080-201ENSMUST00000205429 172 ntBASIC10.01□□□□□ -0.81
VcanQ62059 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
VcanQ62059 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
VcanQ62059 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
VcanQ62059 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
VcanQ62059 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Gm9164-201ENSMUST00000118700 1014 ntBASIC10.01□□□□□ -0.81
VcanQ62059 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC10.01□□□□□ -0.81
VcanQ62059 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.01□□□□□ -0.81
VcanQ62059 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
VcanQ62059 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Gm5910-201ENSMUST00000211819 1746 ntBASIC10.01□□□□□ -0.81
VcanQ62059 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VcanQ62059 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms