Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm18391-201ENSMUST00000217189 658 ntBASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm5071-201ENSMUST00000104922 1035 ntBASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm14231-201ENSMUST00000120090 592 ntBASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm9523-201ENSMUST00000199146 1159 ntBASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm44173-201ENSMUST00000204316 132 ntBASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm8960-201ENSMUST00000219787 788 ntBASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Gm17541-201ENSMUST00000080062 525 ntBASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b2Q3UJB0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Gm7781-201ENSMUST00000117258 788 ntBASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Mir6934-201ENSMUST00000183965 62 ntBASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 AC154197.1-201ENSMUST00000225136 1382 ntBASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b2Q3UJB0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Gm13002-201ENSMUST00000119286 682 ntBASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b2Q3UJB0 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms