Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm15777-201ENSMUST00000123463 876 ntTSL 3 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm9844-201ENSMUST00000170837 485 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm25193-201ENSMUST00000176615 97 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Gm8957-201ENSMUST00000182082 1012 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 AC100209.1-201ENSMUST00000225562 409 ntBASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ush2AQ2QI47 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 4933436H12Rik-203ENSMUST00000207818 1466 ntTSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Map2k7-204ENSMUST00000110995 1558 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Dhcr7-201ENSMUST00000073878 2815 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm14584-201ENSMUST00000118956 637 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm33053-201ENSMUST00000215275 1144 ntTSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 AC126691.2-201ENSMUST00000226185 249 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 AC149294.3-201ENSMUST00000226888 732 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Ucma-201ENSMUST00000027978 756 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm46995-201ENSMUST00000223445 1378 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Cabyr-202ENSMUST00000115857 1557 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 AC159819.3-201ENSMUST00000216940 1837 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm13713-201ENSMUST00000139377 703 ntTSL 3 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm13713-202ENSMUST00000155472 285 ntTSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm23222-201ENSMUST00000158117 76 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm22282-201ENSMUST00000158524 312 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Mir3093-201ENSMUST00000175247 87 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm29977-201ENSMUST00000206804 724 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 AC125350.5-201ENSMUST00000226102 517 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm22054-201ENSMUST00000083395 155 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 AC123665.5-201ENSMUST00000226648 1392 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm7091-201ENSMUST00000116438 586 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 AV039307-201ENSMUST00000124795 1133 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 1810007D17Rik-201ENSMUST00000187629 742 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm18129-201ENSMUST00000208834 1044 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms