Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Traf6P70196 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.97□□□□□ -0.65
Traf6P70196 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Traf6P70196 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Traf6P70196 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Traf6P70196 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.97□□□□□ -0.65
Traf6P70196 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.97□□□□□ -0.65
Traf6P70196 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Traf6P70196 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Traf6P70196 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Traf6P70196 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Traf6P70196 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Traf6P70196 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Traf6P70196 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Traf6P70196 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Traf6P70196 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.96□□□□□ -0.65
Traf6P70196 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.96□□□□□ -0.65
Traf6P70196 B9d1os-201ENSMUST00000137010 674 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Traf6P70196 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Traf6P70196 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.96□□□□□ -0.65
Traf6P70196 Mir6979-201ENSMUST00000183927 56 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Gm29499-201ENSMUST00000189151 486 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Gm28329-201ENSMUST00000191208 689 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Gm29171-201ENSMUST00000191397 486 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Gm8679-201ENSMUST00000210651 1036 ntBASIC10.96□□□□□ -0.65
Traf6P70196 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.96□□□□□ -0.65
Traf6P70196 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.96□□□□□ -0.65
Traf6P70196 AC153936.1-201ENSMUST00000219874 395 ntBASIC10.96□□□□□ -0.65
Traf6P70196 AC154646.1-201ENSMUST00000225011 1092 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Ntng1-201ENSMUST00000051253 327 ntBASIC10.96□□□□□ -0.65
Traf6P70196 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Traf6P70196 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Traf6P70196 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Traf6P70196 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Traf6P70196 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Traf6P70196 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Traf6P70196 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Traf6P70196 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Traf6P70196 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
Traf6P70196 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Traf6P70196 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.95□□□□□ -0.66
Traf6P70196 AC140393.3-201ENSMUST00000228396 1352 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Traf6P70196 Gm24891-201ENSMUST00000104391 136 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Traf6P70196 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Traf6P70196 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Gm22711-201ENSMUST00000116890 133 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Gm13809-201ENSMUST00000117921 597 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.95□□□□□ -0.66
Traf6P70196 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.95□□□□□ -0.66
Traf6P70196 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.95□□□□□ -0.66
Traf6P70196 Gm25732-201ENSMUST00000175168 60 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Gm29011-201ENSMUST00000191059 712 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Gm37246-201ENSMUST00000192665 835 ntBASIC10.95□□□□□ -0.66
Traf6P70196 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.95□□□□□ -0.66
Traf6P70196 AC154595.1-201ENSMUST00000225533 1059 ntBASIC10.95□□□□□ -0.66
Traf6P70196 AC154838.2-201ENSMUST00000226602 747 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.95□□□□□ -0.66
Traf6P70196 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Traf6P70196 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms