Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.21□□□□□ -0.45
Hmgb1P63158 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Gm25492-201ENSMUST00000157383 129 ntBASIC12.21□□□□□ -0.45
Hmgb1P63158 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.21□□□□□ -0.45
Hmgb1P63158 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.21□□□□□ -0.45
Hmgb1P63158 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.21□□□□□ -0.45
Hmgb1P63158 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgb1P63158 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hmgb1P63158 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.21□□□□□ -0.46
Hmgb1P63158 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.21□□□□□ -0.46
Hmgb1P63158 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgb1P63158 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgb1P63158 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgb1P63158 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Hmgb1P63158 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgb1P63158 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgb1P63158 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgb1P63158 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hmgb1P63158 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm12419-201ENSMUST00000116649 636 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm12217-201ENSMUST00000118858 696 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm24992-201ENSMUST00000157412 130 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Mir6927-201ENSMUST00000184494 71 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.2□□□□□ -0.46
Hmgb1P63158 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm19208-201ENSMUST00000213861 912 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm9111-201ENSMUST00000219394 709 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.2□□□□□ -0.46
Hmgb1P63158 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmgb1P63158 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.2□□□□□ -0.46
Hmgb1P63158 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgb1P63158 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms