Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox1P53783 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox1P53783 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC11.34□□□□□ -0.59
Sox1P53783 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Gm43084-201ENSMUST00000200696 947 ntBASIC11.34□□□□□ -0.59
Sox1P53783 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox1P53783 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox1P53783 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.34□□□□□ -0.59
Sox1P53783 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Sox1P53783 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox1P53783 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox1P53783 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox1P53783 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.33□□□□□ -0.59
Sox1P53783 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sox1P53783 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox1P53783 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox1P53783 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Gm38348-201ENSMUST00000191718 2273 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Gm12047-201ENSMUST00000117561 944 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Gm15033-201ENSMUST00000118188 673 ntBASIC11.33□□□□□ -0.6
Sox1P53783 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox1P53783 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Sox1P53783 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox1P53783 Gm28975-201ENSMUST00000186412 686 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Gm43452-201ENSMUST00000201873 991 ntBASIC11.33□□□□□ -0.6
Sox1P53783 AC134607.1-201ENSMUST00000214707 485 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox1P53783 AC165260.2-201ENSMUST00000225371 395 ntBASIC11.33□□□□□ -0.6
Sox1P53783 AC102327.1-201ENSMUST00000226389 742 ntBASIC11.33□□□□□ -0.6
Sox1P53783 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Gm25483-201ENSMUST00000083224 227 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.33□□□□□ -0.6
Sox1P53783 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sox1P53783 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox1P53783 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.33□□□□□ -0.6
Sox1P53783 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox1P53783 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC11.32□□□□□ -0.6
Sox1P53783 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Gm14650-201ENSMUST00000120400 889 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Gm6038-201ENSMUST00000154310 948 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gm23899-201ENSMUST00000158112 90 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gm22669-201ENSMUST00000158723 318 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gm16107-201ENSMUST00000162523 862 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Sox1P53783 Gm19246-201ENSMUST00000173599 255 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gm17797-201ENSMUST00000182175 997 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Gm45359-201ENSMUST00000210635 427 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms