Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.9□□□□□ -0.66
Pdx1P52946 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pdx1P52946 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pdx1P52946 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pdx1P52946 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Pdx1P52946 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Pdx1P52946 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.9□□□□□ -0.67
Pdx1P52946 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.9□□□□□ -0.67
Pdx1P52946 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pdx1P52946 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
Pdx1P52946 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 Snord23-201ENSMUST00000116828 109 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pdx1P52946 Gm28032-201ENSMUST00000184104 96 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.89□□□□□ -0.67
Pdx1P52946 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pdx1P52946 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pdx1P52946 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pdx1P52946 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.88□□□□□ -0.67
Pdx1P52946 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pdx1P52946 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.88□□□□□ -0.67
Pdx1P52946 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.88□□□□□ -0.67
Pdx1P52946 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Gm26134-201ENSMUST00000178484 110 ntBASIC10.88□□□□□ -0.67
Pdx1P52946 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.88□□□□□ -0.67
Pdx1P52946 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.88□□□□□ -0.67
Pdx1P52946 Platr10-202ENSMUST00000191479 818 ntBASIC10.88□□□□□ -0.67
Pdx1P52946 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.88□□□□□ -0.67
Pdx1P52946 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.88□□□□□ -0.67
Pdx1P52946 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.88□□□□□ -0.67
Pdx1P52946 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Gm19009-201ENSMUST00000223072 823 ntBASIC10.88□□□□□ -0.67
Pdx1P52946 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdx1P52946 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pdx1P52946 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms