Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.73□□□□□ -0.69
Rph3aP47708 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Rph3aP47708 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rph3aP47708 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.73□□□□□ -0.69
Rph3aP47708 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rph3aP47708 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.73□□□□□ -0.69
Rph3aP47708 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.73□□□□□ -0.69
Rph3aP47708 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Rph3aP47708 Gm19246-201ENSMUST00000173599 255 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.73□□□□□ -0.69
Rph3aP47708 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rph3aP47708 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Rph3aP47708 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rph3aP47708 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.73□□□□□ -0.69
Rph3aP47708 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rph3aP47708 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rph3aP47708 Gm45354-201ENSMUST00000199820 2557 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rph3aP47708 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Rph3aP47708 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Rph3aP47708 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rph3aP47708 Gm11246-201ENSMUST00000120880 345 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm24992-201ENSMUST00000157412 130 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm6485-201ENSMUST00000160676 439 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm9550-201ENSMUST00000161130 862 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm17391-201ENSMUST00000171036 126 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 Gm37299-201ENSMUST00000193951 826 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm44980-201ENSMUST00000205826 314 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm45118-201ENSMUST00000208928 825 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.72□□□□□ -0.69
Rph3aP47708 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Rph3aP47708 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Rph3aP47708 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.72□□□□□ -0.69
Rph3aP47708 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rph3aP47708 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rph3aP47708 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rph3aP47708 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms