Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
VimP20152 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VimP20152 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VimP20152 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.11□□□□□ -0.63
VimP20152 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
VimP20152 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
VimP20152 Gm12015-201ENSMUST00000117065 843 ntBASIC11.11□□□□□ -0.63
VimP20152 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.11□□□□□ -0.63
VimP20152 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
VimP20152 Gm4310-201ENSMUST00000177847 889 ntBASIC11.11□□□□□ -0.63
VimP20152 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.11□□□□□ -0.63
VimP20152 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.11□□□□□ -0.63
VimP20152 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.11□□□□□ -0.63
VimP20152 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.11□□□□□ -0.63
VimP20152 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.11□□□□□ -0.63
VimP20152 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.11□□□□□ -0.63
VimP20152 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.11□□□□□ -0.63
VimP20152 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
VimP20152 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
VimP20152 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
VimP20152 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Gm9220-201ENSMUST00000190721 2544 ntBASIC11.11□□□□□ -0.63
VimP20152 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.11□□□□□ -0.63
VimP20152 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
VimP20152 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC11.11□□□□□ -0.63
VimP20152 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VimP20152 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VimP20152 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.1□□□□□ -0.63
VimP20152 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.1□□□□□ -0.63
VimP20152 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VimP20152 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
VimP20152 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VimP20152 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
VimP20152 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
VimP20152 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.1□□□□□ -0.63
VimP20152 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.1□□□□□ -0.63
VimP20152 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.1□□□□□ -0.63
VimP20152 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.1□□□□□ -0.63
VimP20152 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.1□□□□□ -0.63
VimP20152 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Gm43633-201ENSMUST00000202455 2330 ntBASIC11.1□□□□□ -0.63
VimP20152 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VimP20152 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.1□□□□□ -0.63
VimP20152 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VimP20152 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VimP20152 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.1□□□□□ -0.63
VimP20152 AC165148.1-201ENSMUST00000224795 2372 ntBASIC11.1□□□□□ -0.63
VimP20152 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
VimP20152 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VimP20152 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VimP20152 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC11.09□□□□□ -0.63
VimP20152 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Gm13140-201ENSMUST00000119840 3151 ntBASIC11.09□□□□□ -0.63
VimP20152 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms