Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm8051-201ENSMUST00000120464 466 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm29354-201ENSMUST00000187613 696 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm18547-201ENSMUST00000192439 811 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm33112-201ENSMUST00000193971 699 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm43489-201ENSMUST00000196810 993 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm8574-201ENSMUST00000203207 924 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm8342-201ENSMUST00000209839 757 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 AC134335.1-201ENSMUST00000227626 329 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm15071-201ENSMUST00000118189 1366 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm42968-201ENSMUST00000198578 1372 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC8.94□□□□□ -0.98
Hoxd3P09027 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Hoxd3P09027 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hoxd3P09027 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm12247-201ENSMUST00000117585 670 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm12757-201ENSMUST00000119465 800 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm12400-201ENSMUST00000120915 1003 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm12208-201ENSMUST00000122004 163 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm7741-201ENSMUST00000181445 989 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Mir7076-201ENSMUST00000183519 74 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Mir7032-201ENSMUST00000185154 79 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm28648-201ENSMUST00000190092 343 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm37299-201ENSMUST00000193951 826 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm36974-201ENSMUST00000194200 1071 ntBASIC8.93□□□□□ -0.98
Hoxd3P09027 Gm36997-201ENSMUST00000195090 707 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms