Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.98□□□□□ -0.81
Rnf13O54965 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm23085-201ENSMUST00000157849 293 ntBASIC9.98□□□□□ -0.81
Rnf13O54965 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Rnf13O54965 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.98□□□□□ -0.81
Rnf13O54965 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.98□□□□□ -0.81
Rnf13O54965 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.98□□□□□ -0.81
Rnf13O54965 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Spata33-207ENSMUST00000212760 4074 ntBASIC9.98□□□□□ -0.81
Rnf13O54965 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rnf13O54965 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.98□□□□□ -0.81
Rnf13O54965 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.98□□□□□ -0.81
Rnf13O54965 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Rnf13O54965 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rnf13O54965 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.98□□□□□ -0.81
Rnf13O54965 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.98□□□□□ -0.81
Rnf13O54965 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.98□□□□□ -0.81
Rnf13O54965 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Rnf13O54965 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Rnf13O54965 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm24891-201ENSMUST00000104391 136 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm13461-201ENSMUST00000120980 662 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm26083-201ENSMUST00000157904 193 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm29499-201ENSMUST00000189151 486 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Gm28329-201ENSMUST00000191208 689 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Gm29171-201ENSMUST00000191397 486 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.97□□□□□ -0.81
Rnf13O54965 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Rnf13O54965 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm21811-201ENSMUST00000096485 930 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Rnf13O54965 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Rnf13O54965 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.97□□□□□ -0.81
Rnf13O54965 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rnf13O54965 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.96□□□□□ -0.81
Rnf13O54965 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.96□□□□□ -0.81
Rnf13O54965 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rnf13O54965 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rnf13O54965 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Rnf13O54965 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms