Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Itgb3O54890 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Itgb3O54890 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Itgb3O54890 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Gm11380-201ENSMUST00000118067 560 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Gm14165-201ENSMUST00000121456 952 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.69□□□□□ -0.54
Itgb3O54890 Gm24809-201ENSMUST00000175318 271 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Gm6423-201ENSMUST00000204315 934 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Itgb3O54890 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Itgb3O54890 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.69□□□□□ -0.54
Itgb3O54890 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.69□□□□□ -0.54
Itgb3O54890 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Itgb3O54890 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Itgb3O54890 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.69□□□□□ -0.54
Itgb3O54890 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Itgb3O54890 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Itgb3O54890 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.68□□□□□ -0.54
Itgb3O54890 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.68□□□□□ -0.54
Itgb3O54890 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.68□□□□□ -0.54
Itgb3O54890 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.68□□□□□ -0.54
Itgb3O54890 Gm13019-201ENSMUST00000120000 276 ntBASIC11.68□□□□□ -0.54
Itgb3O54890 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.68□□□□□ -0.54
Itgb3O54890 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.68□□□□□ -0.54
Itgb3O54890 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.68□□□□□ -0.54
Itgb3O54890 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.68□□□□□ -0.54
Itgb3O54890 Mir8091-201ENSMUST00000183602 139 ntBASIC11.68□□□□□ -0.54
Itgb3O54890 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.68□□□□□ -0.54
Itgb3O54890 Gm5178-201ENSMUST00000219380 898 ntBASIC11.68□□□□□ -0.54
Itgb3O54890 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Itgb3O54890 Gm25517-201ENSMUST00000083865 134 ntBASIC11.68□□□□□ -0.54
Itgb3O54890 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Itgb3O54890 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Itgb3O54890 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.68□□□□□ -0.54
Itgb3O54890 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Itgb3O54890 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Itgb3O54890 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.68□□□□□ -0.54
Itgb3O54890 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.68□□□□□ -0.54
Itgb3O54890 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Itgb3O54890 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Itgb3O54890 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Itgb3O54890 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Itgb3O54890 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.67□□□□□ -0.54
Itgb3O54890 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms