Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a2Q9JLR1 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm11949-201ENSMUST00000117640 372 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm4654-201ENSMUST00000183305 982 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm9132-201ENSMUST00000210182 832 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm32390-201ENSMUST00000212713 1172 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.98□□□□□ -0.81
Sec61a2Q9JLR1 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a2Q9JLR1 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms