Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm37003-201ENSMUST00000194702 2827 ntBASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm26286-201ENSMUST00000104166 134 ntBASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm12015-201ENSMUST00000117065 843 ntBASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.08□□□□□ -0.64
Sf3a3Q9D554 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.08□□□□□ -0.64
Sf3a3Q9D554 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sf3a3Q9D554 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm23270-201ENSMUST00000104055 131 ntBASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm11930-201ENSMUST00000117788 190 ntBASIC11.07□□□□□ -0.64
Sf3a3Q9D554 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm28686-201ENSMUST00000187404 609 ntBASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm43133-201ENSMUST00000197472 463 ntBASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm7653-201ENSMUST00000214567 508 ntBASIC11.07□□□□□ -0.64
Sf3a3Q9D554 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Sf3a3Q9D554 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Osbpl5-202ENSMUST00000119499 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Snord17-201ENSMUST00000104526 238 ntBASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.06□□□□□ -0.64
Sf3a3Q9D554 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms