Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm43165-201ENSMUST00000200842 1635 ntBASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm32914-201ENSMUST00000203815 2228 ntBASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Atf7-201ENSMUST00000096143 390 ntBASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm44907-201ENSMUST00000207423 1633 ntBASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cdh23Q99PF4 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm43066-201ENSMUST00000199589 1260 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 AC154506.2-201ENSMUST00000225481 1276 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 AC116797.2-203ENSMUST00000225290 565 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm8482-201ENSMUST00000117972 471 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm13841-201ENSMUST00000118829 483 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm11449-201ENSMUST00000119175 476 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm8210-201ENSMUST00000178557 483 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm15454-201ENSMUST00000179718 483 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm24180-201ENSMUST00000179961 110 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm29157-201ENSMUST00000188753 612 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gnpnat1-202ENSMUST00000226276 710 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Gm6344-201ENSMUST00000075962 483 ntBASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdh23Q99PF4 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gm35696-202ENSMUST00000220364 778 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms