Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.73□□□□□ -0.53
Clp1Q99LI9 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Gm24294-201ENSMUST00000158295 277 ntBASIC11.73□□□□□ -0.53
Clp1Q99LI9 Gm23582-201ENSMUST00000158530 139 ntBASIC11.73□□□□□ -0.53
Clp1Q99LI9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Gm5254-201ENSMUST00000188353 977 ntBASIC11.73□□□□□ -0.53
Clp1Q99LI9 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.73□□□□□ -0.53
Clp1Q99LI9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clp1Q99LI9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.72□□□□□ -0.53
Clp1Q99LI9 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.72□□□□□ -0.53
Clp1Q99LI9 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.72□□□□□ -0.53
Clp1Q99LI9 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.72□□□□□ -0.53
Clp1Q99LI9 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Clp1Q99LI9 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm14542-201ENSMUST00000118460 1248 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms