Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Gm27530-201ENSMUST00000184096 98 ntBASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Mir6420-201ENSMUST00000185032 102 ntBASIC10.27□□□□□ -0.77
H2afjQ8R1M2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Gm45856-201ENSMUST00000212752 416 ntBASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afjQ8R1M2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm13035-201ENSMUST00000117496 342 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm15515-201ENSMUST00000117827 822 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm12579-201ENSMUST00000118040 783 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm11450-201ENSMUST00000121144 333 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm3150-201ENSMUST00000166418 204 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm7741-201ENSMUST00000181445 989 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 AU022133-201ENSMUST00000200601 873 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm5996-201ENSMUST00000211110 718 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afjQ8R1M2 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms