Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm13215-201ENSMUST00000117559 472 ntBASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm14231-201ENSMUST00000120090 592 ntBASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm8960-201ENSMUST00000219787 788 ntBASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx54Q8K4L0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Gm25154-201ENSMUST00000157123 119 ntBASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Gm26532-201ENSMUST00000180630 690 ntBASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Gm13456-201ENSMUST00000118928 1365 ntBASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx54Q8K4L0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Gm24066-201ENSMUST00000104515 131 ntBASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 H2afy3-201ENSMUST00000151919 1112 ntBASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 AC165260.2-201ENSMUST00000225371 395 ntBASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 141.4 ms