Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm7985-201ENSMUST00000183329 981 ntBASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm37284-201ENSMUST00000193607 539 ntBASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccdc28aQ8CEI3 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm11244-201ENSMUST00000121243 237 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm21778-201ENSMUST00000178779 471 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm23694-201ENSMUST00000179335 110 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm5733-201ENSMUST00000190232 939 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm43179-201ENSMUST00000198797 275 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Ntng1-201ENSMUST00000051253 327 ntBASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc28aQ8CEI3 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Gm13350-201ENSMUST00000120519 479 ntBASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc28aQ8CEI3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms