Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 AC123533.3-201ENSMUST00000228056 454 ntBASIC14.61□□□□□ -0.07
Cps1Q8C196 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Cps1Q8C196 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Gm15476-201ENSMUST00000118247 1191 ntBASIC14.61□□□□□ -0.07
Cps1Q8C196 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Gm38103-201ENSMUST00000191707 864 ntBASIC14.61□□□□□ -0.07
Cps1Q8C196 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Gm5650-201ENSMUST00000209641 598 ntBASIC14.61□□□□□ -0.07
Cps1Q8C196 Gm18124-201ENSMUST00000210695 706 ntBASIC14.61□□□□□ -0.07
Cps1Q8C196 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC14.61□□□□□ -0.07
Cps1Q8C196 AC149294.3-201ENSMUST00000226888 732 ntBASIC14.61□□□□□ -0.07
Cps1Q8C196 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cps1Q8C196 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cps1Q8C196 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC14.6□□□□□ -0.07
Cps1Q8C196 Gm25154-201ENSMUST00000157123 119 ntBASIC14.6□□□□□ -0.07
Cps1Q8C196 Gm19058-201ENSMUST00000192135 598 ntBASIC14.6□□□□□ -0.07
Cps1Q8C196 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Gm18391-201ENSMUST00000217189 658 ntBASIC14.6□□□□□ -0.07
Cps1Q8C196 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cps1Q8C196 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cps1Q8C196 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.59□□□□□ -0.07
Cps1Q8C196 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cps1Q8C196 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cps1Q8C196 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC14.59□□□□□ -0.07
Cps1Q8C196 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC14.59□□□□□ -0.07
Cps1Q8C196 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC14.59□□□□□ -0.07
Cps1Q8C196 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC14.59□□□□□ -0.07
Cps1Q8C196 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cps1Q8C196 Gm24368-201ENSMUST00000175388 106 ntBASIC14.59□□□□□ -0.07
Cps1Q8C196 Gm18552-201ENSMUST00000187425 538 ntBASIC14.59□□□□□ -0.07
Cps1Q8C196 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms