Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm4996-201ENSMUST00000122042 784 ntBASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm26021-201ENSMUST00000158664 131 ntBASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Mir6981-201ENSMUST00000184293 115 ntBASIC9.06□□□□□ -0.96
Smg1Q8BKX6 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm9133-201ENSMUST00000118289 540 ntBASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC9.06□□□□□ -0.96
Smg1Q8BKX6 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC9.06□□□□□ -0.96
Smg1Q8BKX6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm5046-201ENSMUST00000100608 611 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Ighv1-33-201ENSMUST00000193220 350 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm7812-201ENSMUST00000203479 874 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm43362-201ENSMUST00000198192 2470 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smg1Q8BKX6 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Smg1Q8BKX6 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC9.04□□□□□ -0.96
Smg1Q8BKX6 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.04□□□□□ -0.96
Smg1Q8BKX6 Scgb1b21-201ENSMUST00000170232 268 ntBASIC9.04□□□□□ -0.96
Smg1Q8BKX6 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Smg1Q8BKX6 Gm42867-201ENSMUST00000202995 469 ntBASIC9.04□□□□□ -0.96
Smg1Q8BKX6 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.04□□□□□ -0.96
Smg1Q8BKX6 Gm18623-201ENSMUST00000219860 953 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms