Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Snord55-201ENSMUST00000174939 79 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Id2-203ENSMUST00000222667 958 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm12463-201ENSMUST00000118271 849 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm13445-201ENSMUST00000121664 307 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm16165-201ENSMUST00000160140 795 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gm25580-201ENSMUST00000083409 327 ntBASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh19Q80TF3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms