Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd4Q6PDQ2 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm21631-201ENSMUST00000195041 754 ntBASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm17936-201ENSMUST00000199413 988 ntBASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm8216-201ENSMUST00000117232 601 ntBASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm14034-201ENSMUST00000120147 551 ntBASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm13792-201ENSMUST00000121350 423 ntBASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm45310-201ENSMUST00000210436 275 ntBASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 AC134913.2-201ENSMUST00000225017 771 ntBASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd4Q6PDQ2 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Gm15554-201ENSMUST00000120406 913 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 AC155300.1-201ENSMUST00000219134 480 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 AC133496.1-201ENSMUST00000223891 743 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 AC124581.2-201ENSMUST00000225459 282 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 AC154220.1-201ENSMUST00000225033 1705 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 A1cf-204ENSMUST00000224564 1432 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Gm32914-201ENSMUST00000203815 2228 ntBASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd4Q6PDQ2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm12470-201ENSMUST00000117239 1049 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm6500-201ENSMUST00000119412 451 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm16480-201ENSMUST00000120439 832 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm25394-201ENSMUST00000157338 133 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm17944-201ENSMUST00000186351 643 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Gm8226-201ENSMUST00000190511 798 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 AC154477.1-201ENSMUST00000226515 773 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 AC137842.2-201ENSMUST00000227734 797 ntBASIC14.15□□□□□ -0.14
Chd4Q6PDQ2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms