Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gm20781-201ENSMUST00000193154 693 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gm21736-201ENSMUST00000195399 693 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 AC165260.5-201ENSMUST00000224640 1247 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h1Q4VGL6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rc3h1Q4VGL6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rc3h1Q4VGL6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rc3h1Q4VGL6 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.83□□□□□ -0.35
Rc3h1Q4VGL6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Gm18035-201ENSMUST00000211962 589 ntBASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h1Q4VGL6 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rc3h1Q4VGL6 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms