Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm19095-201ENSMUST00000220533 730 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm807-202ENSMUST00000224929 408 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 AC154176.1-201ENSMUST00000225897 220 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 AC131100.2-201ENSMUST00000227701 998 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm26437-201ENSMUST00000082595 105 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm7647-201ENSMUST00000200996 1389 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm11892-201ENSMUST00000117711 1202 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm25971-201ENSMUST00000158953 286 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm46436-201ENSMUST00000221851 1294 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 AC163038.1-201ENSMUST00000223632 1142 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 AC131068.3-201ENSMUST00000228438 1456 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Znf48Q3US17 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gm15394-201ENSMUST00000119656 1308 ntBASIC9.51□□□□□ -0.89
Znf48Q3US17 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Znf48Q3US17 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms