Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm14028-201ENSMUST00000117434 479 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm11511-201ENSMUST00000118146 540 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm20495-201ENSMUST00000173902 235 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm44008-201ENSMUST00000204345 412 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 AC132384.10-201ENSMUST00000217862 1204 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 CT025642.1-201ENSMUST00000224734 1219 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Shisa3Q3UPR0 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Gm44441-201ENSMUST00000203642 2475 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 AC122539.3-201ENSMUST00000218355 1431 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Gm44975-201ENSMUST00000207435 1390 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Gm22133-201ENSMUST00000102082 109 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Gm12601-201ENSMUST00000118994 846 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Gm11573-201ENSMUST00000119956 394 ntBASIC9.66□□□□□ -0.86
Shisa3Q3UPR0 Gm11980-201ENSMUST00000121445 986 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms