Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Sf3b2Q3UJB0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3b2Q3UJB0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3b2Q3UJB0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Sf3b2Q3UJB0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3b2Q3UJB0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3b2Q3UJB0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Sf3b2Q3UJB0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm8525-201ENSMUST00000189674 861 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm18042-201ENSMUST00000219887 790 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm5194-201ENSMUST00000221457 742 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 AC163646.3-202ENSMUST00000228685 691 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 AC163646.3-201ENSMUST00000228879 772 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm15599-201ENSMUST00000122283 1345 ntBASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b2Q3UJB0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Gm42971-201ENSMUST00000199228 2079 ntBASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Gm15476-201ENSMUST00000118247 1191 ntBASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Gm6276-201ENSMUST00000120159 579 ntBASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b2Q3UJB0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Gm5274-201ENSMUST00000182641 1003 ntBASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Gm42803-201ENSMUST00000201051 451 ntBASIC14.31□□□□□ -0.12
Sf3b2Q3UJB0 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms