Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Gm15808-201ENSMUST00000119046 604 ntBASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Gm45398-201ENSMUST00000210561 165 ntBASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Gm23105-201ENSMUST00000083719 134 ntBASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gm2383-201ENSMUST00000181461 807 ntBASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cul4aQ3TCH7 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Gm22144-201ENSMUST00000157402 102 ntBASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.56□□□□□ -0.56
Cul4aQ3TCH7 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms