Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm44629-201ENSMUST00000206951 1840 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm38034-201ENSMUST00000193915 2069 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm14767-201ENSMUST00000121559 586 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm6736-201ENSMUST00000166583 948 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm27680-201ENSMUST00000184192 160 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm27525-201ENSMUST00000184465 107 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm18187-201ENSMUST00000196476 984 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Wdr89-202ENSMUST00000187307 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Ldlr-202ENSMUST00000213114 4318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.03□□□□□ -0.96
Trim63Q38HM4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Sept6-202ENSMUST00000060474 3457 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Col6a1-201ENSMUST00000001147 4100 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim63Q38HM4 Phactr1-202ENSMUST00000110161 1950 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim63Q38HM4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.02□□□□□ -0.96
Trim63Q38HM4 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.02□□□□□ -0.96
Trim63Q38HM4 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim63Q38HM4 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Krt222-201ENSMUST00000038214 2042 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Pcx-202ENSMUST00000113825 4044 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Arhgef10l-204ENSMUST00000105797 3507 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm11893-201ENSMUST00000117829 491 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm8805-201ENSMUST00000117848 313 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm14746-201ENSMUST00000120309 741 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms