Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Npas1P97459 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Npas1P97459 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC9.25□□□□□ -0.93
Npas1P97459 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Npas1P97459 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.25□□□□□ -0.93
Npas1P97459 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Npas1P97459 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Gm26286-201ENSMUST00000104166 134 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.25□□□□□ -0.93
Npas1P97459 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.25□□□□□ -0.93
Npas1P97459 Gm3329-201ENSMUST00000159873 556 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.25□□□□□ -0.93
Npas1P97459 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Npas1P97459 Gm4310-201ENSMUST00000177847 889 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Mir8093-201ENSMUST00000185043 137 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.25□□□□□ -0.93
Npas1P97459 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Gm6621-201ENSMUST00000193251 772 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.25□□□□□ -0.93
Npas1P97459 Gm45224-201ENSMUST00000208203 414 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
Npas1P97459 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Gm5705-201ENSMUST00000066241 711 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Npas1P97459 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Npas1P97459 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Npas1P97459 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.25□□□□□ -0.93
Npas1P97459 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.25□□□□□ -0.93
Npas1P97459 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Npas1P97459 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Npas1P97459 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.24□□□□□ -0.93
Npas1P97459 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Gm8062-201ENSMUST00000139696 444 ntBASIC9.24□□□□□ -0.93
Npas1P97459 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Npas1P97459 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.24□□□□□ -0.93
Npas1P97459 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.24□□□□□ -0.93
Npas1P97459 Gm8885-201ENSMUST00000189382 598 ntBASIC9.24□□□□□ -0.93
Npas1P97459 Gm38117-201ENSMUST00000194653 939 ntBASIC9.24□□□□□ -0.93
Npas1P97459 Gm6450-201ENSMUST00000200896 574 ntBASIC9.24□□□□□ -0.93
Npas1P97459 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.24□□□□□ -0.93
Npas1P97459 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.24□□□□□ -0.93
Npas1P97459 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Npas1P97459 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Npas1P97459 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Npas1P97459 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Npas1P97459 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms