Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.46□□□□□ -0.73
Nup43P59235 Gm12274-201ENSMUST00000120062 385 ntBASIC10.46□□□□□ -0.73
Nup43P59235 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.46□□□□□ -0.73
Nup43P59235 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.46□□□□□ -0.73
Nup43P59235 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Gm26134-201ENSMUST00000178484 110 ntBASIC10.46□□□□□ -0.73
Nup43P59235 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.46□□□□□ -0.73
Nup43P59235 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.46□□□□□ -0.73
Nup43P59235 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.46□□□□□ -0.73
Nup43P59235 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.46□□□□□ -0.73
Nup43P59235 Gm5302-201ENSMUST00000202130 796 ntBASIC10.46□□□□□ -0.73
Nup43P59235 Gm44158-201ENSMUST00000203881 505 ntBASIC10.46□□□□□ -0.73
Nup43P59235 Gm44551-201ENSMUST00000208804 171 ntBASIC10.46□□□□□ -0.73
Nup43P59235 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.46□□□□□ -0.73
Nup43P59235 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.46□□□□□ -0.73
Nup43P59235 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Nup43P59235 AC107452.3-201ENSMUST00000228807 1308 ntBASIC10.46□□□□□ -0.73
Nup43P59235 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nup43P59235 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.46□□□□□ -0.74
Nup43P59235 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.46□□□□□ -0.74
Nup43P59235 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.46□□□□□ -0.74
Nup43P59235 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.46□□□□□ -0.74
Nup43P59235 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nup43P59235 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nup43P59235 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Nup43P59235 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup43P59235 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nup43P59235 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Nup43P59235 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nup43P59235 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.45□□□□□ -0.74
Nup43P59235 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.45□□□□□ -0.74
Nup43P59235 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.45□□□□□ -0.74
Nup43P59235 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.45□□□□□ -0.74
Nup43P59235 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nup43P59235 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.45□□□□□ -0.74
Nup43P59235 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.45□□□□□ -0.74
Nup43P59235 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.45□□□□□ -0.74
Nup43P59235 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.45□□□□□ -0.74
Nup43P59235 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.45□□□□□ -0.74
Nup43P59235 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Gm25343-201ENSMUST00000157460 107 ntBASIC10.45□□□□□ -0.74
Nup43P59235 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.45□□□□□ -0.74
Nup43P59235 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.45□□□□□ -0.74
Nup43P59235 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC10.45□□□□□ -0.74
Nup43P59235 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC10.45□□□□□ -0.74
Nup43P59235 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC10.45□□□□□ -0.74
Nup43P59235 Gm45594-201ENSMUST00000211717 241 ntBASIC10.45□□□□□ -0.74
Nup43P59235 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.45□□□□□ -0.74
Nup43P59235 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.45□□□□□ -0.74
Nup43P59235 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nup43P59235 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.45□□□□□ -0.74
Nup43P59235 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Gm25580-201ENSMUST00000083409 327 ntBASIC10.45□□□□□ -0.74
Nup43P59235 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nup43P59235 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Nup43P59235 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
Nup43P59235 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.45□□□□□ -0.74
Nup43P59235 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nup43P59235 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nup43P59235 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup43P59235 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms