Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tpm1P58771 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.3□□□□□ -0.44
Tpm1P58771 Gm24074-201ENSMUST00000158178 260 ntBASIC12.3□□□□□ -0.44
Tpm1P58771 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.3□□□□□ -0.44
Tpm1P58771 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.3□□□□□ -0.44
Tpm1P58771 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.3□□□□□ -0.44
Tpm1P58771 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.3□□□□□ -0.44
Tpm1P58771 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Tpm1P58771 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tpm1P58771 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tpm1P58771 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.3□□□□□ -0.44
Tpm1P58771 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tpm1P58771 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Gm7967-202ENSMUST00000191042 5042 ntBASIC12.29□□□□□ -0.44
Tpm1P58771 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tpm1P58771 Gm23596-201ENSMUST00000104304 132 ntBASIC12.29□□□□□ -0.44
Tpm1P58771 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.29□□□□□ -0.44
Tpm1P58771 Gm13392-201ENSMUST00000117708 150 ntBASIC12.29□□□□□ -0.44
Tpm1P58771 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.29□□□□□ -0.44
Tpm1P58771 Gm20482-202ENSMUST00000174729 825 ntBASIC12.29□□□□□ -0.44
Tpm1P58771 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.29□□□□□ -0.44
Tpm1P58771 Gm32111-201ENSMUST00000207689 846 ntBASIC12.29□□□□□ -0.44
Tpm1P58771 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tpm1P58771 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tpm1P58771 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tpm1P58771 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.29□□□□□ -0.44
Tpm1P58771 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tpm1P58771 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tpm1P58771 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.28□□□□□ -0.44
Tpm1P58771 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.28□□□□□ -0.44
Tpm1P58771 Gm12247-201ENSMUST00000117585 670 ntBASIC12.28□□□□□ -0.44
Tpm1P58771 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.28□□□□□ -0.44
Tpm1P58771 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.28□□□□□ -0.44
Tpm1P58771 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.28□□□□□ -0.44
Tpm1P58771 Gm44364-201ENSMUST00000198368 141 ntBASIC12.28□□□□□ -0.44
Tpm1P58771 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.28□□□□□ -0.44
Tpm1P58771 Gm45575-201ENSMUST00000210283 548 ntBASIC12.28□□□□□ -0.44
Tpm1P58771 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.28□□□□□ -0.44
Tpm1P58771 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tpm1P58771 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tpm1P58771 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC12.28□□□□□ -0.44
Tpm1P58771 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tpm1P58771 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tpm1P58771 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tpm1P58771 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tpm1P58771 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tpm1P58771 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tpm1P58771 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.27□□□□□ -0.44
Tpm1P58771 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC12.27□□□□□ -0.44
Tpm1P58771 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tpm1P58771 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Tpm1P58771 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC12.27□□□□□ -0.44
Tpm1P58771 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tpm1P58771 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tpm1P58771 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms