Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfx1P48377 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rfx1P48377 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rfx1P48377 Gm43221-201ENSMUST00000197612 2071 ntBASIC13.17□□□□□ -0.3
Rfx1P48377 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfx1P48377 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rfx1P48377 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC13.17□□□□□ -0.3
Rfx1P48377 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfx1P48377 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfx1P48377 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfx1P48377 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfx1P48377 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rfx1P48377 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfx1P48377 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfx1P48377 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rfx1P48377 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rfx1P48377 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.16□□□□□ -0.3
Rfx1P48377 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.16□□□□□ -0.3
Rfx1P48377 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Rfx1P48377 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 Gm38321-201ENSMUST00000195053 235 ntBASIC13.16□□□□□ -0.3
Rfx1P48377 Gm43452-201ENSMUST00000201873 991 ntBASIC13.16□□□□□ -0.3
Rfx1P48377 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Gm32111-201ENSMUST00000207689 846 ntBASIC13.16□□□□□ -0.3
Rfx1P48377 Gm6108-201ENSMUST00000208365 367 ntBASIC13.16□□□□□ -0.3
Rfx1P48377 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.16□□□□□ -0.3
Rfx1P48377 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rfx1P48377 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx1P48377 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfx1P48377 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.15□□□□□ -0.3
Rfx1P48377 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rfx1P48377 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Gm13461-201ENSMUST00000120980 662 ntBASIC13.15□□□□□ -0.3
Rfx1P48377 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Rfx1P48377 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfx1P48377 Gm3150-201ENSMUST00000166418 204 ntBASIC13.15□□□□□ -0.3
Rfx1P48377 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfx1P48377 Gm43058-201ENSMUST00000197645 625 ntBASIC13.15□□□□□ -0.3
Rfx1P48377 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.15□□□□□ -0.3
Rfx1P48377 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Rfx1P48377 Gm8342-201ENSMUST00000209839 757 ntBASIC13.15□□□□□ -0.3
Rfx1P48377 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Gm45574-201ENSMUST00000210921 331 ntBASIC13.15□□□□□ -0.3
Rfx1P48377 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.15□□□□□ -0.3
Rfx1P48377 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC13.15□□□□□ -0.3
Rfx1P48377 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rfx1P48377 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfx1P48377 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC13.15□□□□□ -0.3
Rfx1P48377 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx1P48377 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rfx1P48377 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rfx1P48377 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx1P48377 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rfx1P48377 Gm44888-201ENSMUST00000209119 2541 ntBASIC13.14□□□□□ -0.31
Rfx1P48377 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.14□□□□□ -0.31
Rfx1P48377 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx1P48377 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms