Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm45845-201ENSMUST00000207326 582 ntBASIC10.96□□□□□ -0.65
Sox18P43680 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.96□□□□□ -0.65
Sox18P43680 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.96□□□□□ -0.65
Sox18P43680 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sox18P43680 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sox18P43680 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox18P43680 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox18P43680 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Sox18P43680 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Sox18P43680 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.96□□□□□ -0.66
Sox18P43680 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.96□□□□□ -0.66
Sox18P43680 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Sox18P43680 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.96□□□□□ -0.66
Sox18P43680 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.96□□□□□ -0.66
Sox18P43680 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Sox18P43680 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Sox18P43680 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox18P43680 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Sox18P43680 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.95□□□□□ -0.66
Sox18P43680 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.95□□□□□ -0.66
Sox18P43680 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Sox18P43680 Gm13341-201ENSMUST00000120780 672 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.95□□□□□ -0.66
Sox18P43680 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Gm9517-201ENSMUST00000195021 874 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Gm43774-201ENSMUST00000196327 878 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.95□□□□□ -0.66
Sox18P43680 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 AC147101.1-201ENSMUST00000217964 312 ntBASIC10.95□□□□□ -0.66
Sox18P43680 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox18P43680 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.95□□□□□ -0.66
Sox18P43680 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Sox18P43680 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox18P43680 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox18P43680 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms