Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.2■□□□□ 0.18
Chd1P40201 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC16.2■□□□□ 0.18
Chd1P40201 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Chd1P40201 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Chd1P40201 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chd1P40201 Gm45165-201ENSMUST00000207763 1631 ntBASIC16.2■□□□□ 0.18
Chd1P40201 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chd1P40201 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Chd1P40201 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chd1P40201 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gm14407-201ENSMUST00000121260 447 ntBASIC16.19■□□□□ 0.18
Chd1P40201 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC16.19■□□□□ 0.18
Chd1P40201 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gm6967-201ENSMUST00000182599 1007 ntBASIC16.19■□□□□ 0.18
Chd1P40201 AC153948.2-201ENSMUST00000218112 505 ntBASIC16.19■□□□□ 0.18
Chd1P40201 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC16.19■□□□□ 0.18
Chd1P40201 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chd1P40201 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gm13303-201ENSMUST00000117125 1284 ntBASIC16.19■□□□□ 0.18
Chd1P40201 Gm11546-201ENSMUST00000120297 354 ntBASIC16.19■□□□□ 0.18
Chd1P40201 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC16.19■□□□□ 0.18
Chd1P40201 Gm43761-201ENSMUST00000202132 991 ntBASIC16.19■□□□□ 0.18
Chd1P40201 AC118704.1-201ENSMUST00000225022 695 ntBASIC16.19■□□□□ 0.18
Chd1P40201 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Chd1P40201 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd1P40201 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd1P40201 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Erich3-203ENSMUST00000189969 3460 ntBASIC16.18■□□□□ 0.18
Chd1P40201 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Chd1P40201 Gm6768-201ENSMUST00000022467 1878 ntBASIC16.18■□□□□ 0.18
Chd1P40201 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.18■□□□□ 0.18
Chd1P40201 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Gm15580-201ENSMUST00000121587 556 ntBASIC16.18■□□□□ 0.18
Chd1P40201 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC16.18■□□□□ 0.18
Chd1P40201 Gm24074-201ENSMUST00000158178 260 ntBASIC16.18■□□□□ 0.18
Chd1P40201 Gm6098-201ENSMUST00000180234 330 ntBASIC16.18■□□□□ 0.18
Chd1P40201 Gm8955-201ENSMUST00000182945 1008 ntBASIC16.18■□□□□ 0.18
Chd1P40201 Gm18894-201ENSMUST00000198794 694 ntBASIC16.18■□□□□ 0.18
Chd1P40201 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Gm10015-201ENSMUST00000072570 465 ntBASIC16.18■□□□□ 0.18
Chd1P40201 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chd1P40201 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd1P40201 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Gm13197-201ENSMUST00000117204 225 ntBASIC16.17■□□□□ 0.18
Chd1P40201 Gm18859-201ENSMUST00000118792 825 ntBASIC16.17■□□□□ 0.18
Chd1P40201 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC16.17■□□□□ 0.18
Chd1P40201 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd1P40201 Gm7456-201ENSMUST00000182862 1011 ntBASIC16.17■□□□□ 0.18
Chd1P40201 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Trav4-1-201ENSMUST00000199078 330 ntBASIC16.17■□□□□ 0.18
Chd1P40201 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd1P40201 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC16.17■□□□□ 0.18
Chd1P40201 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chd1P40201 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chd1P40201 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd1P40201 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd1P40201 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms