Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm13461-201ENSMUST00000120980 662 ntBASIC10.07□□□□□ -0.8
Hmgn1P18608 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm21778-201ENSMUST00000178779 471 ntBASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm29067-201ENSMUST00000190821 470 ntBASIC10.07□□□□□ -0.8
Hmgn1P18608 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm44262-201ENSMUST00000204969 372 ntBASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hmgn1P18608 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hmgn1P18608 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Hmgn1P18608 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm14130-201ENSMUST00000118417 987 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm8302-201ENSMUST00000119217 852 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm8199-201ENSMUST00000121323 823 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.06□□□□□ -0.8
Hmgn1P18608 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm7255-201ENSMUST00000187371 908 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm9540-201ENSMUST00000188230 478 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm37284-201ENSMUST00000193607 539 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm43758-201ENSMUST00000199500 367 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.06□□□□□ -0.8
Hmgn1P18608 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hmgn1P18608 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms