Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.67□□□□□ -0.7
Fv4P11370 Gm4909-201ENSMUST00000118749 794 ntBASIC10.67□□□□□ -0.7
Fv4P11370 Gm8737-201ENSMUST00000122208 642 ntBASIC10.67□□□□□ -0.7
Fv4P11370 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.67□□□□□ -0.7
Fv4P11370 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Fv4P11370 Gm19353-201ENSMUST00000184561 445 ntBASIC10.67□□□□□ -0.7
Fv4P11370 Gm7255-201ENSMUST00000187371 908 ntBASIC10.67□□□□□ -0.7
Fv4P11370 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.67□□□□□ -0.7
Fv4P11370 Platr10-202ENSMUST00000191479 818 ntBASIC10.67□□□□□ -0.7
Fv4P11370 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.67□□□□□ -0.7
Fv4P11370 Gm45398-201ENSMUST00000210561 165 ntBASIC10.67□□□□□ -0.7
Fv4P11370 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Fv4P11370 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Fv4P11370 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.67□□□□□ -0.7
Fv4P11370 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Fv4P11370 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Fv4P11370 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.67□□□□□ -0.7
Fv4P11370 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.66□□□□□ -0.7
Fv4P11370 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.66□□□□□ -0.7
Fv4P11370 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Fv4P11370 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Gm7985-201ENSMUST00000183329 981 ntBASIC10.66□□□□□ -0.7
Fv4P11370 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.66□□□□□ -0.7
Fv4P11370 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.66□□□□□ -0.7
Fv4P11370 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Gm5363-201ENSMUST00000211927 938 ntBASIC10.66□□□□□ -0.7
Fv4P11370 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.66□□□□□ -0.7
Fv4P11370 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.66□□□□□ -0.7
Fv4P11370 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.66□□□□□ -0.7
Fv4P11370 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.66□□□□□ -0.7
Fv4P11370 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fv4P11370 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Fv4P11370 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.66□□□□□ -0.7
Fv4P11370 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.65□□□□□ -0.7
Fv4P11370 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Fv4P11370 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.65□□□□□ -0.7
Fv4P11370 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fv4P11370 Gm9133-201ENSMUST00000118289 540 ntBASIC10.65□□□□□ -0.7
Fv4P11370 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.65□□□□□ -0.7
Fv4P11370 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.65□□□□□ -0.7
Fv4P11370 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.65□□□□□ -0.7
Fv4P11370 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.65□□□□□ -0.7
Fv4P11370 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms