Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Gm8399-201ENSMUST00000082300 1117 ntBASIC8.05□□□□□ -1.12
TcraP01849 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
TcraP01849 AC109214.1-201ENSMUST00000219520 1372 ntBASIC8.05□□□□□ -1.12
TcraP01849 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
TcraP01849 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
TcraP01849 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 AC131068.2-201ENSMUST00000226175 1453 ntBASIC8.05□□□□□ -1.12
TcraP01849 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
TcraP01849 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TcraP01849 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
TcraP01849 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Gm13297-201ENSMUST00000120205 934 ntBASIC8.04□□□□□ -1.12
TcraP01849 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC8.04□□□□□ -1.12
TcraP01849 Mir1896-201ENSMUST00000122641 81 ntBASIC8.04□□□□□ -1.12
TcraP01849 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Gm29164-201ENSMUST00000185454 1024 ntBASIC8.04□□□□□ -1.12
TcraP01849 Gm3096-201ENSMUST00000185770 364 ntBASIC8.04□□□□□ -1.12
TcraP01849 Gm9230-201ENSMUST00000188228 532 ntBASIC8.04□□□□□ -1.12
TcraP01849 Gm31256-201ENSMUST00000194705 506 ntBASIC8.04□□□□□ -1.12
TcraP01849 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
TcraP01849 Gm18054-201ENSMUST00000207539 555 ntBASIC8.04□□□□□ -1.12
TcraP01849 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 Gm9368-201ENSMUST00000219348 831 ntBASIC8.04□□□□□ -1.12
TcraP01849 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 AC154252.2-201ENSMUST00000223593 767 ntBASIC8.04□□□□□ -1.12
TcraP01849 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
TcraP01849 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
TcraP01849 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC8.04□□□□□ -1.12
TcraP01849 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
TcraP01849 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TcraP01849 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
TcraP01849 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TcraP01849 Gm5846-201ENSMUST00000193146 1414 ntBASIC8.03□□□□□ -1.12
TcraP01849 Gm19680-201ENSMUST00000095050 1513 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms