Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd2E9PZM4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 AC129590.1-201ENSMUST00000225573 852 ntBASIC14.8□□□□□ -0.04
Chd2E9PZM4 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm25561-201ENSMUST00000104607 125 ntBASIC14.8□□□□□ -0.04
Chd2E9PZM4 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm24466-201ENSMUST00000179978 109 ntBASIC14.8□□□□□ -0.04
Chd2E9PZM4 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC14.8□□□□□ -0.04
Chd2E9PZM4 AC192333.3-201ENSMUST00000224041 463 ntBASIC14.8□□□□□ -0.04
Chd2E9PZM4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.8□□□□□ -0.04
Chd2E9PZM4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd2E9PZM4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chd2E9PZM4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Gm15033-201ENSMUST00000118188 673 ntBASIC14.79□□□□□ -0.04
Chd2E9PZM4 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC14.79□□□□□ -0.04
Chd2E9PZM4 Gm12221-201ENSMUST00000125096 1131 ntBASIC14.79□□□□□ -0.04
Chd2E9PZM4 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Gm19566-201ENSMUST00000199576 610 ntBASIC14.79□□□□□ -0.04
Chd2E9PZM4 AC154643.1-201ENSMUST00000225643 625 ntBASIC14.79□□□□□ -0.04
Chd2E9PZM4 AC140426.1-201ENSMUST00000227933 459 ntBASIC14.79□□□□□ -0.04
Chd2E9PZM4 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd2E9PZM4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd2E9PZM4 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd2E9PZM4 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd2E9PZM4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd2E9PZM4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd2E9PZM4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chd2E9PZM4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chd2E9PZM4 Gm23081-201ENSMUST00000157845 297 ntBASIC14.78□□□□□ -0.04
Chd2E9PZM4 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd2E9PZM4 Gm6463-201ENSMUST00000182090 966 ntBASIC14.78□□□□□ -0.04
Chd2E9PZM4 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC14.78□□□□□ -0.04
Chd2E9PZM4 Gm17815-201ENSMUST00000198305 895 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms