Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.89□□□□□ -0.67
Rrp8Q9DB85 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Snord17-201ENSMUST00000104526 238 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Mir8091-201ENSMUST00000183602 139 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm8384-201ENSMUST00000190905 704 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm37723-201ENSMUST00000194480 565 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm7880-201ENSMUST00000203748 871 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm10580-201ENSMUST00000097985 396 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm10582-201ENSMUST00000097987 396 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm10583-201ENSMUST00000097988 396 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Rrp8Q9DB85 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm11380-201ENSMUST00000118067 560 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm23647-201ENSMUST00000175042 109 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Rn5s-201ENSMUST00000177555 119 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm22109-201ENSMUST00000177995 119 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm22291-201ENSMUST00000178027 119 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.87□□□□□ -0.67
Rrp8Q9DB85 Gm23284-201ENSMUST00000178069 119 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms