Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm44216-201ENSMUST00000203942 157 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.53□□□□□ -0.08
U2af1Q9D883 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
U2af1Q9D883 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
U2af1Q9D883 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Bcl2-202ENSMUST00000189999 2841 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
U2af1Q9D883 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.52□□□□□ -0.08
U2af1Q9D883 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Gm19027-201ENSMUST00000187291 1355 ntBASIC14.52□□□□□ -0.08
U2af1Q9D883 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.52□□□□□ -0.08
U2af1Q9D883 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
U2af1Q9D883 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
U2af1Q9D883 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Gm11380-201ENSMUST00000118067 560 ntBASIC14.52□□□□□ -0.09
U2af1Q9D883 Gm13351-201ENSMUST00000118087 414 ntBASIC14.52□□□□□ -0.09
U2af1Q9D883 Gm8876-201ENSMUST00000120768 1122 ntBASIC14.52□□□□□ -0.09
U2af1Q9D883 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.52□□□□□ -0.09
U2af1Q9D883 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC14.52□□□□□ -0.09
U2af1Q9D883 Mir7035-201ENSMUST00000184713 82 ntBASIC14.52□□□□□ -0.09
U2af1Q9D883 Gm5298-201ENSMUST00000201122 892 ntBASIC14.52□□□□□ -0.09
U2af1Q9D883 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.52□□□□□ -0.09
U2af1Q9D883 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC14.52□□□□□ -0.09
U2af1Q9D883 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
U2af1Q9D883 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC14.52□□□□□ -0.09
U2af1Q9D883 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
U2af1Q9D883 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
U2af1Q9D883 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
U2af1Q9D883 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Gm17221-201ENSMUST00000163909 481 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Gm17073-201ENSMUST00000168069 556 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 Mir8091-201ENSMUST00000183602 139 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.51□□□□□ -0.09
U2af1Q9D883 AC134793.1-202ENSMUST00000227444 803 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 AC124732.3-201ENSMUST00000221835 1765 ntBASIC14.51□□□□□ -0.09
U2af1Q9D883 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
U2af1Q9D883 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms