Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.11□□□□□ -0.63
Sf3a3Q9D554 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gm37597-201ENSMUST00000191853 382 ntBASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gm6266-201ENSMUST00000203844 806 ntBASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gm2553-201ENSMUST00000215986 605 ntBASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gm5705-201ENSMUST00000066241 711 ntBASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Sf3a3Q9D554 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Gm6963-201ENSMUST00000147879 379 ntBASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Gm9797-202ENSMUST00000218003 294 ntBASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Morn2-202ENSMUST00000227729 656 ntBASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Gm10748-202ENSMUST00000194396 2379 ntBASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Grik1-211ENSMUST00000228188 3221 ntBASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sf3a3Q9D554 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms