Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm9111-201ENSMUST00000219394 709 ntBASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Gm10020-201ENSMUST00000081993 612 ntBASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Gm10051-201ENSMUST00000145209 414 ntBASIC12.63□□□□□ -0.39
Trim11Q99PQ2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.63□□□□□ -0.39
Trim11Q99PQ2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Gm6546-201ENSMUST00000192096 766 ntBASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Gm45398-201ENSMUST00000210561 165 ntBASIC12.63□□□□□ -0.39
Trim11Q99PQ2 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim11Q99PQ2 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm11949-201ENSMUST00000117640 372 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm15573-201ENSMUST00000119487 540 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm4917-201ENSMUST00000121452 650 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm28032-201ENSMUST00000184104 96 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Mir8115-201ENSMUST00000184992 119 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm25125-201ENSMUST00000083340 136 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim11Q99PQ2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim11Q99PQ2 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms