Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.5□□□□□ -0.89
Tram1Q91V04 Auts2-212ENSMUST00000178555 309 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm28746-201ENSMUST00000187453 380 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm6108-201ENSMUST00000208365 367 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm17827-201ENSMUST00000211825 742 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Tram1Q91V04 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.5□□□□□ -0.89
Tram1Q91V04 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Tram1Q91V04 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tram1Q91V04 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.5□□□□□ -0.89
Tram1Q91V04 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Tram1Q91V04 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.5□□□□□ -0.89
Tram1Q91V04 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tram1Q91V04 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.49□□□□□ -0.89
Tram1Q91V04 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm22018-201ENSMUST00000104357 131 ntBASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm15264-201ENSMUST00000118050 502 ntBASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm14109-201ENSMUST00000118814 309 ntBASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm27046-201ENSMUST00000182160 463 ntBASIC9.49□□□□□ -0.89
Tram1Q91V04 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.49□□□□□ -0.89
Tram1Q91V04 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Tram1Q91V04 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tram1Q91V04 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.48□□□□□ -0.89
Tram1Q91V04 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Tram1Q91V04 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms