Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Clrn1Q8K445 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm9133-201ENSMUST00000118289 540 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm2875-201ENSMUST00000211333 360 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm45770-201ENSMUST00000212105 616 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm10179-201ENSMUST00000086233 688 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.44□□□□□ -0.74
Clrn1Q8K445 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Clrn1Q8K445 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.43□□□□□ -0.74
Clrn1Q8K445 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.43□□□□□ -0.74
Clrn1Q8K445 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm22902-201ENSMUST00000158488 302 ntBASIC10.43□□□□□ -0.74
Clrn1Q8K445 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.43□□□□□ -0.74
Clrn1Q8K445 AC132260.2-201ENSMUST00000224482 344 ntBASIC10.43□□□□□ -0.74
Clrn1Q8K445 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Clrn1Q8K445 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms