Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cchcr1Q8K2I2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Gm45398-201ENSMUST00000210561 165 ntBASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cchcr1Q8K2I2 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cchcr1Q8K2I2 Gm44369-201ENSMUST00000204543 2175 ntBASIC13.08□□□□□ -0.31
Cchcr1Q8K2I2 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cchcr1Q8K2I2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Gm15236-201ENSMUST00000117309 379 ntBASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Gm13045-201ENSMUST00000119019 712 ntBASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Gm11956-201ENSMUST00000119525 512 ntBASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Gm29199-201ENSMUST00000187766 775 ntBASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cchcr1Q8K2I2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Gm28746-201ENSMUST00000187453 380 ntBASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Gm38321-201ENSMUST00000195053 235 ntBASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cchcr1Q8K2I2 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms