Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm13045-201ENSMUST00000119019 712 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm10051-201ENSMUST00000145209 414 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm8459-201ENSMUST00000162504 760 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm32111-201ENSMUST00000207689 846 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm6867-201ENSMUST00000219165 425 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc87Q8CDL9 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 AA474408-201ENSMUST00000098110 3339 ntBASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc87Q8CDL9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms