Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm10254-201ENSMUST00000052888 867 ntBASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm8420-201ENSMUST00000097103 598 ntBASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.94□□□□□ -0.66
Pcdh19Q80TF3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Snord17-201ENSMUST00000104526 238 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm11560-201ENSMUST00000117567 948 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm12986-201ENSMUST00000119037 967 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm11340-201ENSMUST00000119226 412 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Gm25830-201ENSMUST00000158923 132 ntBASIC10.93□□□□□ -0.66
Pcdh19Q80TF3 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms